Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | SAMN03003324_03226 | Not Available | Positive | 3535294 - 3536046 | 27038.6 |
| hypothetical protein | SAMN03003324_03227 | Not Available | Positive | 3536106 - 3536288 | 6389.25 |
| protein of unknown function | SAMN03003324_03228 | Not Available | Negative | 3536291 - 3536581 | 11014.9 |
| dna replication and repair protein recf | SAMN03003324_03229 | Not Available | Negative | 3536574 - 3537677 | 42862.0 |
| tetratricopeptide repeat-containing protein | SAMN03003324_03230 | Not Available | Positive | 3537877 - 3538548 | 24884.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN03003324_03231 | Not Available | Positive | 3538624 - 3539115 | 17238.6 |
| bacillithiol system protein ytxj | SAMN03003324_03232 | Not Available | Positive | 3539184 - 3539516 | 12492.8 |
| uncharacterized osmc-related protein | SAMN03003324_03233 | Not Available | Negative | 3539503 - 3539910 | 14676.7 |
| lipoic acid synthetase | SAMN03003324_03234 | Not Available | Positive | 3540069 - 3540947 | 33022.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_03235 | Not Available | Positive | 3540979 - 3541569 | 22515.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

