Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN03003324_03216 | Not Available | Negative | 3524497 - 3525507 | 37644.1 |
| pa domain-containing protein | SAMN03003324_03217 | Not Available | Negative | 3525603 - 3527054 | 52351.7 |
| octaprenyl-diphosphate synthase | SAMN03003324_03218 | Not Available | Negative | 3527138 - 3528109 | 36522.2 |
| thioredoxin reductase (nadph) | SAMN03003324_03219 | Not Available | Negative | 3528184 - 3529164 | 36766.3 |
| glyoxylase, beta-lactamase superfamily ii | SAMN03003324_03220 | Not Available | Negative | 3529157 - 3530578 | 51627.9 |
| asparaginase | SAMN03003324_03221 | Not Available | Negative | 3530708 - 3531724 | 37186.7 |
| tatd dnase family protein | SAMN03003324_03222 | Not Available | Negative | 3531729 - 3532496 | 28766.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN03003324_03223 | Not Available | Negative | 3532572 - 3533546 | 34990.3 |
| phosphoesterase recj domain-containing protein | SAMN03003324_03224 | Not Available | Negative | 3533654 - 3534664 | 37606.8 |
| nucleoside diphosphate kinase | SAMN03003324_03225 | Not Available | Positive | 3534773 - 3535192 | 15124.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

