Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN03003324_03196 | Not Available | Positive | 3492982 - 3494496 | 58316.6 |
| two component transcriptional regulator, lyttr family | SAMN03003324_03197 | Not Available | Positive | 3494500 - 3495183 | 25761.3 |
| signal transduction histidine kinase | SAMN03003324_03198 | Not Available | Positive | 3495334 - 3498810 | 130333.0 |
| chemotaxis protein methyltransferase cher | SAMN03003324_03199 | Not Available | Positive | 3498812 - 3499648 | 32201.4 |
| signal transduction histidine kinase | SAMN03003324_03200 | Not Available | Positive | 3499683 - 3501269 | 58988.8 |
| peptidyl-trna hydrolase | SAMN03003324_03201 | Not Available | Negative | 3501270 - 3501830 | 20591.0 |
| large subunit ribosomal protein l25 | SAMN03003324_03202 | Not Available | Negative | 3502087 - 3502665 | 21285.2 |
| ribose-phosphate pyrophosphokinase | SAMN03003324_03203 | Not Available | Negative | 3502745 - 3503686 | 34160.5 |
| Trna-gln | Not Available | Not Available | Positive | 3503756 - 3503829 | Not Available |
| protein of unknown function | SAMN03003324_03205 | Not Available | Positive | 3504335 - 3507370 | 114629.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

