Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l30p | SAMN03003324_03166 | Not Available | Negative | 3473800 - 3473979 | 6661.42 |
| ssu ribosomal protein s5p | SAMN03003324_03167 | Not Available | Negative | 3473984 - 3474502 | 18024.1 |
| large subunit ribosomal protein l18 | SAMN03003324_03168 | Not Available | Negative | 3474521 - 3474874 | 12644.2 |
| large subunit ribosomal protein l6 | SAMN03003324_03169 | Not Available | Negative | 3474880 - 3475437 | 20131.6 |
| small subunit ribosomal protein s8 | SAMN03003324_03170 | Not Available | Negative | 3475456 - 3475854 | 14569.0 |
| ssu ribosomal protein s14p | SAMN03003324_03171 | Not Available | Negative | 3475984 - 3476253 | 9987.38 |
| lsu ribosomal protein l5p | SAMN03003324_03172 | Not Available | Negative | 3476253 - 3476828 | 21587.5 |
| large subunit ribosomal protein l24 | SAMN03003324_03173 | Not Available | Negative | 3476828 - 3477169 | 12071.1 |
| lsu ribosomal protein l14p | SAMN03003324_03174 | Not Available | Negative | 3477171 - 3477539 | 13363.4 |
| ssu ribosomal protein s17p | SAMN03003324_03175 | Not Available | Negative | 3477541 - 3477795 | 9770.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

