Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | SAMN03003324_03146 | Not Available | Negative | 3453704 - 3454525 | 30213.8 |
| lipid-a-disaccharide kinase | SAMN03003324_03147 | Not Available | Negative | 3454476 - 3455549 | 40686.5 |
| delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN03003324_03148 | Not Available | Positive | 3455739 - 3457367 | 59585.8 |
| carbonic anhydrase | SAMN03003324_03149 | Not Available | Negative | 3457448 - 3458119 | 25084.9 |
| sulfate permease, sulp family | SAMN03003324_03150 | Not Available | Negative | 3458121 - 3459728 | 57477.0 |
| hypothetical protein | SAMN03003324_03151 | Not Available | Negative | 3459800 - 3460141 | 13110.0 |
| hypothetical protein | SAMN03003324_03152 | Not Available | Positive | 3460328 - 3461560 | 46053.3 |
| putative aminopeptidase frvx | SAMN03003324_03153 | Not Available | Positive | 3461676 - 3462791 | 41460.5 |
| nucleotidyl transferase | SAMN03003324_03154 | Not Available | Positive | 3463053 - 3463952 | 34132.6 |
| molecular chaperone dnak | SAMN03003324_03155 | Not Available | Negative | 3464091 - 3466007 | 68382.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

