Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enolase | SAMN03003324_03116 | Not Available | Positive | 3417087 - 3418379 | 46525.3 |
| septum formation initiator | SAMN03003324_03117 | Not Available | Positive | 3418567 - 3418866 | 12128.4 |
| uncharacterized membrane protein yeih | SAMN03003324_03118 | Not Available | Negative | 3418863 - 3419474 | 22368.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN03003324_03119 | Not Available | Negative | 3419583 - 3420326 | 26291.8 |
| agmatine deiminase | SAMN03003324_03120 | Not Available | Negative | 3420408 - 3421463 | 39316.4 |
| n-carbamoylputrescine amidase | SAMN03003324_03121 | Not Available | Negative | 3421447 - 3422322 | 32665.6 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN03003324_03122 | Not Available | Negative | 3422736 - 3425114 | 89332.6 |
| ribonucleoside-diphosphate reductase beta chain | SAMN03003324_03123 | Not Available | Negative | 3425170 - 3426147 | 37596.8 |
| rare lipoprotein a | SAMN03003324_03124 | Not Available | Negative | 3426458 - 3426841 | 14126.1 |
| peptide-methionine (r)-s-oxide reductase | SAMN03003324_03125 | Not Available | Negative | 3426951 - 3427439 | 17785.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

