Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_03096 | Not Available | Positive | 3392565 - 3393021 | 17845.8 |
| integrase core domain-containing protein | SAMN03003324_03097 | Not Available | Positive | 3393022 - 3393295 | 10201.9 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN03003324_03098 | Not Available | Positive | 3393622 - 3394944 | 47175.2 |
| iron complex outermembrane recepter protein | SAMN03003324_03099 | Not Available | Positive | 3394944 - 3397001 | 75690.4 |
| single-strand dna-binding protein | SAMN03003324_03100 | Not Available | Negative | 3397060 - 3397395 | 12815.5 |
| hypothetical protein | SAMN03003324_03101 | Not Available | Positive | 3397558 - 3397920 | 14139.6 |
| hypothetical protein | SAMN03003324_03102 | Not Available | Positive | 3398065 - 3398778 | 27686.8 |
| hypothetical protein | SAMN03003324_03103 | Not Available | Positive | 3398785 - 3399417 | 24032.1 |
| mfs transporter, dha1 family, arabinose polymer transporter | SAMN03003324_03104 | Not Available | Positive | 3399474 - 3400679 | 42020.5 |
| prolipoprotein diacylglyceryl transferase | SAMN03003324_03105 | Not Available | Negative | 3400669 - 3401505 | 31673.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

