Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN03003324_00246 | Not Available | Positive | 264351 - 265304 | 34156.3 |
| rnase z | SAMN03003324_00247 | Not Available | Negative | 265382 - 266293 | 33968.0 |
| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) | SAMN03003324_00248 | Not Available | Negative | 266294 - 266683 | 14410.2 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN03003324_00249 | Not Available | Negative | 266715 - 267668 | 36169.1 |
| phosphate starvation-inducible protein phoh | SAMN03003324_00250 | Not Available | Negative | 267705 - 268670 | 35642.5 |
| hypothetical protein | SAMN03003324_00251 | Not Available | Positive | 268773 - 269552 | 29139.4 |
| hypothetical protein | SAMN03003324_00252 | Not Available | Positive | 269606 - 270148 | 20776.2 |
| hypothetical protein | SAMN03003324_00253 | Not Available | Positive | 270152 - 270298 | 5704.13 |
| uncharacterized conserved protein, duf1015 family | SAMN03003324_00254 | Not Available | Negative | 270279 - 271490 | 45749.2 |
| d-3-phosphoglycerate dehydrogenase | SAMN03003324_00255 | Not Available | Negative | 271546 - 272496 | 34040.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

