Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 3387240 - 3387313 | Not Available |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_03087 | Not Available | Positive | 3387696 - 3388265 | 22271.8 |
| protein of unknown function | SAMN03003324_03088 | Not Available | Positive | 3388436 - 3389083 | 23999.1 |
| hypothetical protein | SAMN03003324_03089 | Not Available | Positive | 3389096 - 3389989 | 31819.7 |
| putative hydrolase of the had superfamily | SAMN03003324_03090 | Not Available | Positive | 3390046 - 3390663 | 23833.4 |
| hypothetical protein | SAMN03003324_03091 | Not Available | Negative | 3390683 - 3391282 | 22136.9 |
| hypothetical protein | SAMN03003324_03092 | Not Available | Negative | 3391324 - 3391446 | 4955.39 |
| iron-binding zinc finger cdgsh type | SAMN03003324_03093 | Not Available | Positive | 3391596 - 3391820 | 8096.63 |
| hypothetical protein | SAMN03003324_03094 | Not Available | Positive | 3391920 - 3392075 | 6072.16 |
| hypothetical protein | SAMN03003324_03095 | Not Available | Positive | 3392200 - 3392568 | 13877.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

