Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-mannosidase, putative | SAMN03003324_03076 | Not Available | Positive | 3368470 - 3370758 | 86006.8 |
| serine/threonine protein kinase | SAMN03003324_03077 | Not Available | Positive | 3371150 - 3372484 | 49481.5 |
| hypothetical protein | SAMN03003324_03078 | Not Available | Positive | 3372499 - 3373464 | 37131.5 |
| serine/threonine protein phosphatase prpc | SAMN03003324_03079 | Not Available | Positive | 3373555 - 3375102 | 56646.1 |
| cell division protein ftsw, lipid ii flippase | SAMN03003324_03080 | Not Available | Positive | 3375105 - 3379034 | 143366.0 |
| hypothetical protein | SAMN03003324_03081 | Not Available | Positive | 3379048 - 3379839 | 29686.4 |
| tonb-dependent receptor plug domain | SAMN03003324_03082 | Not Available | Positive | 3379883 - 3382207 | 87352.3 |
| protein of unknown function | SAMN03003324_03083 | Not Available | Positive | 3382211 - 3383023 | 30159.7 |
| hypothetical protein | SAMN03003324_03084 | Not Available | Positive | 3383045 - 3383731 | 25389.2 |
| superfamily ii dna or rna helicase, snf2 family | SAMN03003324_03085 | Not Available | Negative | 3383743 - 3387114 | 130062.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

