Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system permease protein | SAMN03003324_03056 | Not Available | Positive | 3344170 - 3345219 | 36248.0 |
| iron complex transport system atp-binding protein | SAMN03003324_03057 | Not Available | Positive | 3345216 - 3345998 | 28990.7 |
| putative hemin transport protein | SAMN03003324_03058 | Not Available | Positive | 3346009 - 3347037 | 38373.8 |
| ribose-5-phosphate isomerase | SAMN03003324_03059 | Not Available | Positive | 3347190 - 3347882 | 25060.3 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN03003324_03060 | Not Available | Positive | 3347857 - 3348429 | 21651.4 |
| dna-binding transcriptional regulator, lysr family | SAMN03003324_03061 | Not Available | Positive | 3348488 - 3349411 | 35459.9 |
| ser-trna(thr) hydrolase /threonyl-trna synthetase | SAMN03003324_03062 | Not Available | Positive | 3349553 - 3351478 | 72935.1 |
| bacterial translation initiation factor 3 (bif-3) | SAMN03003324_03063 | Not Available | Positive | 3351492 - 3352061 | 21506.4 |
| large subunit ribosomal protein l35 | SAMN03003324_03064 | Not Available | Positive | 3352088 - 3352288 | 7312.21 |
| lsu ribosomal protein l20p | SAMN03003324_03065 | Not Available | Positive | 3352362 - 3352706 | 13028.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

