Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_03046 | Not Available | Positive | 3327497 - 3330619 | 113010.0 |
| starch-binding associating with outer membrane | SAMN03003324_03047 | Not Available | Positive | 3330644 - 3332242 | 59411.3 |
| hypothetical protein | SAMN03003324_03048 | Not Available | Positive | 3332232 - 3333665 | 52406.7 |
| beta-galactosidase | SAMN03003324_03049 | Not Available | Positive | 3333783 - 3336155 | 88346.6 |
| ferritin-like metal-binding protein ycie | SAMN03003324_03050 | Not Available | Positive | 3336276 - 3336791 | 19167.2 |
| putative endopeptidase | SAMN03003324_03051 | Not Available | Positive | 3337015 - 3339054 | 75355.3 |
| polyisoprenoid-binding protein ycei | SAMN03003324_03052 | Not Available | Negative | 3339129 - 3339710 | 21000.9 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN03003324_03053 | Not Available | Positive | 3339984 - 3342077 | 77476.3 |
| hmuy protein | SAMN03003324_03054 | Not Available | Positive | 3342106 - 3343185 | 38392.4 |
| iron complex transport system substrate-binding protein | SAMN03003324_03055 | Not Available | Positive | 3343314 - 3344177 | 30268.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

