Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_03036 | Not Available | Positive | 3314898 - 3315167 | 10477.6 |
| hypothetical protein | SAMN03003324_03037 | Not Available | Positive | 3315549 - 3315764 | 8376.01 |
| hypothetical protein | SAMN03003324_03038 | Not Available | Negative | 3315833 - 3316417 | 21610.5 |
| beta-lactamase class d | SAMN03003324_03039 | Not Available | Negative | 3316543 - 3317367 | 31527.2 |
| protein of unknown function | SAMN03003324_03040 | Not Available | Negative | 3317377 - 3318081 | 27526.1 |
| hypothetical protein | SAMN03003324_03041 | Not Available | Positive | 3318364 - 3319677 | 48261.2 |
| hypothetical protein | SAMN03003324_03042 | Not Available | Negative | 3319754 - 3319981 | 8620.2 |
| hypothetical protein | SAMN03003324_03043 | Not Available | Negative | 3319988 - 3320233 | 9614.6 |
| signal transduction histidine kinase | SAMN03003324_03044 | Not Available | Positive | 3320369 - 3324490 | 156148.0 |
| alpha-d-xyloside xylohydrolase | SAMN03003324_03045 | Not Available | Positive | 3324625 - 3327489 | 109252.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

