Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | SAMN03003324_03026 | Not Available | Negative | 3302533 - 3303441 | 33772.9 |
| dna helicase, putative | SAMN03003324_03027 | Not Available | Positive | 3303528 - 3305423 | 70105.9 |
| small conductance mechanosensitive channel | SAMN03003324_03028 | Not Available | Positive | 3305456 - 3306289 | 30343.4 |
| serine o-acetyltransferase | SAMN03003324_03029 | Not Available | Positive | 3306312 - 3307115 | 29797.8 |
| cysteine synthase b | SAMN03003324_03030 | Not Available | Positive | 3307126 - 3308007 | 31995.1 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN03003324_03031 | Not Available | Negative | 3308084 - 3310345 | 82494.2 |
| protein of unknown function | SAMN03003324_03032 | Not Available | Positive | 3310522 - 3310989 | 17926.4 |
| sugar or nucleoside kinase, ribokinase family | SAMN03003324_03033 | Not Available | Positive | 3311052 - 3311963 | 33023.2 |
| predicted atpase | SAMN03003324_03034 | Not Available | Positive | 3312574 - 3313791 | 46087.9 |
| hypothetical protein | SAMN03003324_03035 | Not Available | Positive | 3313788 - 3314300 | 19639.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

