Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pap2 superfamily c-terminal | SAMN03003324_03016 | Not Available | Positive | 3290960 - 3291637 | 25621.2 |
| dipeptidase d | SAMN03003324_03017 | Not Available | Positive | 3291720 - 3293180 | 52816.2 |
| enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-coa reductase (nad+) | SAMN03003324_03018 | Not Available | Positive | 3293221 - 3294414 | 43056.4 |
| conserved hypothetical protein | SAMN03003324_03019 | Not Available | Negative | 3294510 - 3294965 | 16719.8 |
| hypothetical protein | SAMN03003324_03020 | Not Available | Negative | 3295137 - 3295283 | 5571.06 |
| chromosomal replication initiator protein | SAMN03003324_03021 | Not Available | Positive | 3295669 - 3297099 | 53746.0 |
| predicted acyltransferase | SAMN03003324_03022 | Not Available | Positive | 3297398 - 3298516 | 42287.1 |
| uncharacterized conserved protein ydiu, upf0061 family | SAMN03003324_03023 | Not Available | Negative | 3298566 - 3300131 | 58689.1 |
| alpha-l-fucosidase | SAMN03003324_03024 | Not Available | Negative | 3300214 - 3302130 | 70562.8 |
| hypothetical protein | SAMN03003324_03025 | Not Available | Positive | 3302282 - 3302527 | 8402.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

