Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02996 | Not Available | Negative | 3270622 - 3270876 | 9621.13 |
| sulfite reductase (ferredoxin) | SAMN03003324_02997 | Not Available | Positive | 3271086 - 3273179 | 77917.2 |
| uroporphyrinogen-iii c-methyltransferase | SAMN03003324_02998 | Not Available | Positive | 3273176 - 3273970 | 28652.7 |
| hypothetical protein | SAMN03003324_02999 | Not Available | Positive | 3273974 - 3275440 | 53266.3 |
| phosphoadenosine phosphosulfate reductase | SAMN03003324_03000 | Not Available | Positive | 3275442 - 3276146 | 27001.0 |
| sulfate adenylyltransferase subunit 2 | SAMN03003324_03001 | Not Available | Positive | 3276161 - 3277066 | 34361.8 |
| sulfate adenylyltransferase subunit 1 | SAMN03003324_03002 | Not Available | Positive | 3277066 - 3278313 | 46461.6 |
| hypothetical protein | SAMN03003324_03003 | Not Available | Positive | 3278432 - 3278956 | 19557.7 |
| atp-binding cassette, subfamily b | SAMN03003324_03004 | Not Available | Positive | 3279027 - 3280766 | 63834.4 |
| atp-binding cassette, subfamily b | SAMN03003324_03005 | Not Available | Positive | 3280756 - 3282522 | 65454.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

