Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02976 | Not Available | Positive | 3243589 - 3244287 | 24562.0 |
| polyphosphate kinase | SAMN03003324_02977 | Not Available | Positive | 3244523 - 3246580 | 79512.9 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN03003324_02978 | Not Available | Positive | 3246586 - 3247467 | 33081.2 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN03003324_02979 | Not Available | Negative | 3247558 - 3248004 | 16580.2 |
| 6-phosphogluconolactonase | SAMN03003324_02980 | Not Available | Negative | 3248070 - 3248795 | 26857.9 |
| glucose-6-phosphate 1-dehydrogenase | SAMN03003324_02981 | Not Available | Negative | 3248795 - 3250309 | 57674.0 |
| 6-phosphogluconate dehydrogenase (decarboxylating) | SAMN03003324_02982 | Not Available | Negative | 3250329 - 3251744 | 52377.7 |
| polyphosphate glucokinase | SAMN03003324_02983 | Not Available | Negative | 3251734 - 3252510 | 28492.0 |
| permuted papain-like amidase enzyme, yaef/yiix, c92 family | SAMN03003324_02984 | Not Available | Negative | 3252702 - 3253349 | 24081.0 |
| glpgli family protein | SAMN03003324_02985 | Not Available | Negative | 3253362 - 3254087 | 26966.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

