Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (isoleucine patch superfamily) | SAMN03003324_02936 | Not Available | Negative | 3206124 - 3206711 | 21061.7 |
| arac-type dna-binding protein | SAMN03003324_02937 | Not Available | Positive | 3206899 - 3207795 | 34492.2 |
| cubico group peptidase, beta-lactamase class c family | SAMN03003324_02938 | Not Available | Positive | 3207973 - 3209361 | 52225.6 |
| hypothetical protein | SAMN03003324_02939 | Not Available | Negative | 3209453 - 3210157 | 26936.1 |
| ferritin-like metal-binding protein ycie | SAMN03003324_02940 | Not Available | Negative | 3210176 - 3210775 | 21461.3 |
| hypothetical protein | SAMN03003324_02941 | Not Available | Negative | 3210792 - 3213023 | 83696.5 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN03003324_02942 | Not Available | Positive | 3213200 - 3214249 | 39164.8 |
| arac-type dna-binding protein | SAMN03003324_02943 | Not Available | Positive | 3214544 - 3215398 | 32380.4 |
| nad(p)h-binding | SAMN03003324_02944 | Not Available | Positive | 3215418 - 3216053 | 22950.3 |
| putative lumazine-binding | SAMN03003324_02945 | Not Available | Positive | 3216273 - 3216830 | 20298.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

