Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl aminopeptidase | SAMN03003324_02926 | Not Available | Positive | 3198262 - 3199023 | 27546.7 |
| atp-binding cassette, subfamily f, member 3 | SAMN03003324_02927 | Not Available | Negative | 3199212 - 3200846 | 61975.5 |
| hypothetical protein | SAMN03003324_02928 | Not Available | Negative | 3200936 - 3201472 | 20819.4 |
| transcriptional regulator, hxlr family | SAMN03003324_02929 | Not Available | Negative | 3201661 - 3202011 | 13349.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03003324_02930 | Not Available | Positive | 3202116 - 3202859 | 25702.7 |
| hypothetical protein | SAMN03003324_02931 | Not Available | Negative | 3202958 - 3203560 | 22958.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_02932 | Not Available | Negative | 3203562 - 3204038 | 18360.3 |
| hypothetical protein | SAMN03003324_02933 | Not Available | Negative | 3204227 - 3204703 | 17163.5 |
| alcohol dehydrogenase (nadp+) | SAMN03003324_02934 | Not Available | Negative | 3204714 - 3205895 | 42839.6 |
| hypothetical protein | SAMN03003324_02935 | Not Available | Negative | 3205904 - 3206089 | 6816.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

