Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03003324_02916 | Not Available | Positive | 3187426 - 3187989 | 22180.9 |
| hypothetical protein | SAMN03003324_02917 | Not Available | Positive | 3188238 - 3190079 | 68767.8 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | SAMN03003324_02918 | Not Available | Negative | 3190069 - 3190938 | 33039.9 |
| predicted naringenin-chalcone synthase | SAMN03003324_02919 | Not Available | Positive | 3190979 - 3192082 | 40521.7 |
| methyltransferase domain-containing protein | SAMN03003324_02920 | Not Available | Positive | 3192075 - 3192770 | 27223.9 |
| dehydrogenase (flavoprotein) | SAMN03003324_02921 | Not Available | Positive | 3192767 - 3193894 | 42315.1 |
| 2,4-dienoyl-coa reductase | SAMN03003324_02922 | Not Available | Negative | 3193954 - 3195060 | 40446.8 |
| transcriptional regulator, arsr family | SAMN03003324_02923 | Not Available | Negative | 3195078 - 3195380 | 11561.0 |
| signal transduction histidine kinase | SAMN03003324_02924 | Not Available | Negative | 3195474 - 3196844 | 51273.1 |
| arac-type dna-binding protein | SAMN03003324_02925 | Not Available | Negative | 3197317 - 3198147 | 31929.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

