Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02886 | Not Available | Negative | 3153921 - 3154073 | 5502.7 |
| hypothetical protein | SAMN03003324_02887 | Not Available | Positive | 3154477 - 3155016 | 20177.4 |
| protein of unknown function | SAMN03003324_02888 | Not Available | Negative | 3155090 - 3155953 | 31144.0 |
| iron complex outermembrane recepter protein | SAMN03003324_02889 | Not Available | Negative | 3156008 - 3158776 | 99330.0 |
| cytochrome c peroxidase | SAMN03003324_02890 | Not Available | Negative | 3158861 - 3159814 | 35200.8 |
| polyisoprenoid-binding protein ycei | SAMN03003324_02891 | Not Available | Negative | 3159914 - 3160561 | 23571.3 |
| peroxiredoxin | SAMN03003324_02892 | Not Available | Negative | 3160593 - 3161912 | 48792.4 |
| peroxiredoxin | SAMN03003324_02893 | Not Available | Negative | 3161967 - 3163268 | 47972.5 |
| hypothetical protein | SAMN03003324_02894 | Not Available | Negative | 3164043 - 3165572 | 56797.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_02895 | Not Available | Negative | 3165591 - 3168632 | 111291.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

