Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd domain-containing protein | SAMN03003324_02876 | Not Available | Positive | 3144515 - 3145915 | 52939.5 |
| transcriptional regulator, deor family | SAMN03003324_02877 | Not Available | Positive | 3145976 - 3146746 | 28240.4 |
| transcriptional regulator, deor family | SAMN03003324_02878 | Not Available | Positive | 3146870 - 3147634 | 27840.0 |
| protein of unknown function | SAMN03003324_02879 | Not Available | Negative | 3147671 - 3148264 | 22615.8 |
| sugar phosphate permease | SAMN03003324_02880 | Not Available | Positive | 3148371 - 3149624 | 44516.3 |
| nad(p)h dehydrogenase (quinone) | SAMN03003324_02881 | Not Available | Negative | 3149621 - 3150823 | 42859.7 |
| arac-type dna-binding protein | SAMN03003324_02882 | Not Available | Positive | 3150918 - 3151700 | 30077.4 |
| protein of unknown function duf2625 | SAMN03003324_02883 | Not Available | Positive | 3151790 - 3152557 | 28795.4 |
| dna alkylation repair enzyme | SAMN03003324_02884 | Not Available | Negative | 3152740 - 3153537 | 30203.4 |
| transcriptional regulator, hxlr family | SAMN03003324_02885 | Not Available | Positive | 3153558 - 3153977 | 16175.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

