Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multisubunit sodium/proton antiporter, mrpe subunit (tc 2.a.63.1) | SAMN03003324_02856 | Not Available | Negative | 3121445 - 3121927 | 18758.5 |
| multisubunit sodium/proton antiporter, mrpd subunit (tc 2.a.63.1) | SAMN03003324_02857 | Not Available | Negative | 3121947 - 3123458 | 55197.6 |
| multisubunit sodium/proton antiporter, mrpc subunit (tc 2.a.63.1) | SAMN03003324_02858 | Not Available | Negative | 3123455 - 3123808 | 12814.1 |
| multisubunit sodium/proton antiporter, mrpb subunit (tc 2.a.63.1) | SAMN03003324_02859 | Not Available | Negative | 3123811 - 3124221 | 14761.6 |
| multisubunit sodium/proton antiporter, mrpa subunit (tc 2.a.63.1) | SAMN03003324_02860 | Not Available | Negative | 3124223 - 3126523 | 83459.8 |
| signal transduction histidine kinase | SAMN03003324_02861 | Not Available | Negative | 3126677 - 3127801 | 41961.3 |
| carbohydrate-binding family 9 | SAMN03003324_02862 | Not Available | Positive | 3128028 - 3128654 | 23410.6 |
| glucose/galactose transporter | SAMN03003324_02863 | Not Available | Positive | 3128665 - 3129954 | 46064.8 |
| thioredoxin | SAMN03003324_02864 | Not Available | Negative | 3129991 - 3130740 | 27951.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN03003324_02865 | Not Available | Negative | 3130784 - 3131929 | 42372.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

