Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_02846 | Not Available | Positive | 3114575 - 3115792 | 45885.7 |
| hypothetical protein | SAMN03003324_02847 | Not Available | Negative | 3115813 - 3116760 | 37329.4 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN03003324_02848 | Not Available | Negative | 3116838 - 3117806 | 36161.5 |
| stress responsive a/b barrel domain | SAMN03003324_02849 | Not Available | Positive | 3117887 - 3118183 | 11186.2 |
| regulator of nucleoside diphosphate kinase | SAMN03003324_02850 | Not Available | Positive | 3118669 - 3119061 | 14936.4 |
| modulator of drug activity b | SAMN03003324_02851 | Not Available | Positive | 3119206 - 3119844 | 24357.6 |
| quinol monooxygenase ygin | SAMN03003324_02852 | Not Available | Positive | 3119816 - 3120106 | 10854.9 |
| ahpc/tsa family protein | SAMN03003324_02853 | Not Available | Negative | 3120176 - 3120670 | 18762.9 |
| multisubunit sodium/proton antiporter, mrpg subunit | SAMN03003324_02854 | Not Available | Negative | 3120800 - 3121180 | 13667.8 |
| multicomponent na+:h+ antiporter subunit f | SAMN03003324_02855 | Not Available | Negative | 3121173 - 3121448 | 10274.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

