Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_02836 | Not Available | Negative | 3103980 - 3105101 | 41708.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN03003324_02837 | Not Available | Negative | 3105123 - 3106313 | 45224.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_02838 | Not Available | Negative | 3106323 - 3107534 | 46619.3 |
| acetyltransferase (isoleucine patch superfamily) | SAMN03003324_02839 | Not Available | Negative | 3107581 - 3108195 | 22461.7 |
| o-antigen ligase like membrane protein | SAMN03003324_02840 | Not Available | Negative | 3108293 - 3109750 | 53823.9 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN03003324_02841 | Not Available | Negative | 3109765 - 3111915 | 80555.9 |
| outer membrane efflux protein | SAMN03003324_02842 | Not Available | Negative | 3111939 - 3112616 | 25547.7 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN03003324_02843 | Not Available | Negative | 3112647 - 3113705 | 40067.9 |
| response regulator receiver domain-containing protein | SAMN03003324_02844 | Not Available | Negative | 3113709 - 3114095 | 14707.9 |
| hypothetical protein | SAMN03003324_02845 | Not Available | Positive | 3114400 - 3114567 | 6352.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

