Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid adenylation domain-containing protein | SAMN03003324_02826 | Not Available | Positive | 3083466 - 3089981 | 238499.0 |
| amino acid adenylation domain-containing protein | SAMN03003324_02827 | Not Available | Positive | 3089984 - 3094003 | 151858.0 |
| 4'-phosphopantetheinyl transferase | SAMN03003324_02828 | Not Available | Positive | 3094009 - 3094701 | 26751.9 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN03003324_02829 | Not Available | Negative | 3094711 - 3095877 | 44070.8 |
| hypothetical protein | SAMN03003324_02830 | Not Available | Negative | 3095881 - 3096792 | 34708.7 |
| hypothetical protein | SAMN03003324_02831 | Not Available | Negative | 3096868 - 3098472 | 61430.0 |
| hypothetical protein | SAMN03003324_02832 | Not Available | Positive | 3098841 - 3100115 | 45924.3 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN03003324_02833 | Not Available | Negative | 3100205 - 3101557 | 50081.4 |
| choline dehydrogenase | SAMN03003324_02834 | Not Available | Negative | 3101707 - 3103401 | 62930.1 |
| gluconate 2-dehydrogenase subunit 3 | SAMN03003324_02835 | Not Available | Negative | 3103408 - 3103980 | 21482.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

