Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02816 | Not Available | Positive | 3066016 - 3066810 | 30003.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_02817 | Not Available | Positive | 3066930 - 3067514 | 22672.8 |
| fecr family protein | SAMN03003324_02818 | Not Available | Positive | 3067590 - 3068789 | 44923.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_02819 | Not Available | Positive | 3068906 - 3072142 | 121084.0 |
| susd family protein | SAMN03003324_02820 | Not Available | Positive | 3072170 - 3073852 | 64176.1 |
| surface antigen | SAMN03003324_02821 | Not Available | Negative | 3073911 - 3076493 | 98250.7 |
| hypothetical protein | SAMN03003324_02822 | Not Available | Negative | 3076513 - 3078903 | 91995.6 |
| sdia-regulated | SAMN03003324_02823 | Not Available | Negative | 3078903 - 3079769 | 32654.2 |
| polyphosphate kinase | SAMN03003324_02824 | Not Available | Negative | 3079785 - 3081809 | 77992.5 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN03003324_02825 | Not Available | Negative | 3081811 - 3083019 | 45557.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

