Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN03003324_02796 | Not Available | Negative | 3044407 - 3045081 | 25322.4 |
| hypothetical protein | SAMN03003324_02797 | Not Available | Positive | 3045175 - 3045423 | 9352.41 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN03003324_02798 | Not Available | Negative | 3045420 - 3046175 | 26694.0 |
| transcriptional regulator, arac family | SAMN03003324_02799 | Not Available | Negative | 3046273 - 3047181 | 35286.2 |
| transcriptional regulator, arac family | SAMN03003324_02800 | Not Available | Positive | 3047277 - 3048185 | 35370.5 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN03003324_02801 | Not Available | Positive | 3048277 - 3049320 | 37767.2 |
| hypothetical protein | SAMN03003324_02802 | Not Available | Positive | 3049436 - 3049942 | 19621.1 |
| hypothetical protein | SAMN03003324_02803 | Not Available | Positive | 3049939 - 3050463 | 20444.3 |
| Trna-leu | Not Available | Not Available | Positive | 3050590 - 3050671 | Not Available |
| substrate-binding protein | SAMN03003324_02805 | Not Available | Negative | 3050768 - 3051565 | 30139.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

