Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-heptose:lps heptosyltransferase | SAMN03003324_02786 | Not Available | Positive | 3031135 - 3032178 | 38650.5 |
| phosphohistidine phosphatase | SAMN03003324_02787 | Not Available | Positive | 3032171 - 3032674 | 18973.7 |
| amp nucleosidase | SAMN03003324_02788 | Not Available | Negative | 3032671 - 3033531 | 31854.7 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN03003324_02789 | Not Available | Negative | 3033634 - 3034878 | 45905.5 |
| atp-dependent clp protease, protease subunit | SAMN03003324_02790 | Not Available | Negative | 3034882 - 3035571 | 25570.8 |
| trigger factor | SAMN03003324_02791 | Not Available | Negative | 3035763 - 3037109 | 50923.6 |
| cobalt-zinc-cadmium resistance protein czca | SAMN03003324_02792 | Not Available | Negative | 3037367 - 3040498 | 115810.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN03003324_02793 | Not Available | Negative | 3040532 - 3041632 | 40109.4 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN03003324_02794 | Not Available | Negative | 3041644 - 3042942 | 49629.4 |
| signal transduction histidine kinase | SAMN03003324_02795 | Not Available | Negative | 3043042 - 3044397 | 51656.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

