Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein c (pspc) family protein | SAMN03003324_02776 | Not Available | Negative | 3021446 - 3021667 | 8802.11 |
| orotidine-5'-phosphate decarboxylase | SAMN03003324_02777 | Not Available | Negative | 3021786 - 3022616 | 30513.2 |
| transcription termination factor rho | SAMN03003324_02778 | Not Available | Positive | 3022886 - 3024604 | 63857.7 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN03003324_02779 | Not Available | Positive | 3024611 - 3025303 | 25323.0 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN03003324_02780 | Not Available | Negative | 3025373 - 3025750 | 14257.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN03003324_02781 | Not Available | Negative | 3025772 - 3026269 | 18073.0 |
| protease-4 | SAMN03003324_02782 | Not Available | Positive | 3026321 - 3028090 | 64765.8 |
| hypothetical protein | SAMN03003324_02783 | Not Available | Negative | 3028119 - 3028760 | 23042.1 |
| dna polymerase (family 10) | SAMN03003324_02784 | Not Available | Positive | 3028836 - 3030512 | 62581.0 |
| protein of unknown function | SAMN03003324_02785 | Not Available | Positive | 3030533 - 3031135 | 23327.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

