Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized oxidoreductase | SAMN03003324_02766 | Not Available | Negative | 3012534 - 3013298 | 28038.6 |
| uncharacterized oxidoreductase | SAMN03003324_02767 | Not Available | Negative | 3013324 - 3014052 | 26007.8 |
| n-ethylmaleimide reductase | SAMN03003324_02768 | Not Available | Negative | 3014076 - 3015176 | 40436.8 |
| transcriptional regulator, hxlr family | SAMN03003324_02769 | Not Available | Positive | 3015271 - 3015675 | 15600.5 |
| protein of unknown function | SAMN03003324_02770 | Not Available | Positive | 3015888 - 3016358 | 17693.3 |
| tigr02453 family protein | SAMN03003324_02771 | Not Available | Positive | 3016378 - 3017040 | 25526.4 |
| Trna-leu | Not Available | Not Available | Positive | 3017106 - 3017192 | Not Available |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN03003324_02773 | Not Available | Negative | 3017252 - 3018013 | 28520.3 |
| outer membrane lipoprotein-sorting protein | SAMN03003324_02774 | Not Available | Negative | 3018033 - 3018683 | 24140.9 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN03003324_02775 | Not Available | Negative | 3018699 - 3021374 | 99853.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

