Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_02746 | Not Available | Positive | 2988503 - 2989756 | 47600.6 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN03003324_02747 | Not Available | Negative | 2989774 - 2991168 | 51317.5 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN03003324_02748 | Not Available | Negative | 2991251 - 2994409 | 114676.0 |
| membrane fusion protein, multidrug efflux system | SAMN03003324_02749 | Not Available | Negative | 2994418 - 2995530 | 40548.9 |
| hypothetical protein | SAMN03003324_02750 | Not Available | Negative | 2995817 - 2995948 | 5248.66 |
| transcriptional regulator | SAMN03003324_02751 | Not Available | Positive | 2995989 - 2996615 | 23473.9 |
| hypothetical protein | SAMN03003324_02752 | Not Available | Negative | 2996627 - 2996875 | 9626.85 |
| drug resistance transporter, emrb/qaca subfamily | SAMN03003324_02753 | Not Available | Negative | 2997201 - 2998583 | 49663.5 |
| dna-binding transcriptional regulator, lrp family | SAMN03003324_02754 | Not Available | Positive | 2998707 - 2999204 | 18831.2 |
| iron complex outermembrane recepter protein | SAMN03003324_02755 | Not Available | Positive | 2999452 - 3001803 | 85842.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

