Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02736 | Not Available | Negative | 2978403 - 2978831 | 15952.4 |
| uncharacterized iron-regulated membrane protein | SAMN03003324_02737 | Not Available | Negative | 2978903 - 2980231 | 49132.9 |
| luciferase family oxidoreductase, group 1 | SAMN03003324_02738 | Not Available | Negative | 2980419 - 2981432 | 36657.6 |
| hypothetical protein | SAMN03003324_02739 | Not Available | Positive | 2981727 - 2981966 | 8831.54 |
| hypothetical protein | SAMN03003324_02740 | Not Available | Positive | 2981957 - 2982451 | 18741.1 |
| Trna-leu | Not Available | Not Available | Positive | 2983430 - 2983513 | Not Available |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN03003324_02742 | Not Available | Positive | 2983740 - 2984396 | 24421.3 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN03003324_02743 | Not Available | Positive | 2984570 - 2986750 | 82192.6 |
| muramoyltetrapeptide carboxypeptidase | SAMN03003324_02744 | Not Available | Positive | 2986794 - 2987831 | 38002.0 |
| pp_02696 | SAMN03003324_02745 | Not Available | Negative | 2987828 - 2988409 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

