Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| basic amino acid/polyamine antiporter, apa family | SAMN03003324_02726 | Not Available | Negative | 2962336 - 2963763 | 51893.2 |
| tetratricopeptide repeat-containing protein | SAMN03003324_02727 | Not Available | Negative | 2963790 - 2966693 | 109492.0 |
| carboxypeptidase c (cathepsin a) | SAMN03003324_02728 | Not Available | Negative | 2966764 - 2968401 | 61271.7 |
| carboxypeptidase c (cathepsin a) | SAMN03003324_02729 | Not Available | Negative | 2968425 - 2969963 | 57434.2 |
| starch-binding associating with outer membrane | SAMN03003324_02730 | Not Available | Negative | 2970058 - 2971578 | 56016.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_02731 | Not Available | Negative | 2971611 - 2974739 | 112772.0 |
| hypothetical protein | SAMN03003324_02732 | Not Available | Positive | 2975099 - 2975293 | 7369.19 |
| hypothetical protein | SAMN03003324_02733 | Not Available | Negative | 2975262 - 2975942 | 25292.0 |
| nicotinate phosphoribosyltransferase | SAMN03003324_02734 | Not Available | Positive | 2976108 - 2977334 | 46854.6 |
| uncharacterized protein | SAMN03003324_02735 | Not Available | Negative | 2977384 - 2978400 | 36563.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

