Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02716 | Not Available | Positive | 2949598 - 2950842 | 46468.9 |
| rna polymerase sigma factor, sigma-70 family | SAMN03003324_02717 | Not Available | Positive | 2950980 - 2951594 | 23875.6 |
| fecr family protein | SAMN03003324_02718 | Not Available | Positive | 2951676 - 2952701 | 38966.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN03003324_02719 | Not Available | Positive | 2952712 - 2955420 | 101459.0 |
| phospholipase c | SAMN03003324_02720 | Not Available | Negative | 2955465 - 2957969 | 94990.1 |
| quinol monooxygenase ygin | SAMN03003324_02721 | Not Available | Positive | 2958218 - 2958526 | 11230.5 |
| Trna-gly | Not Available | Not Available | Positive | 2958674 - 2958749 | Not Available |
| hypothetical protein | SAMN03003324_02723 | Not Available | Positive | 2959157 - 2959318 | 6150.51 |
| uncharacterized conserved protein | SAMN03003324_02724 | Not Available | Positive | 2959379 - 2960272 | 34749.4 |
| amidohydrolase family protein | SAMN03003324_02725 | Not Available | Negative | 2960723 - 2962321 | 59188.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

