Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN03003324_02706 | Not Available | Positive | 2941103 - 2942257 | 41487.4 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN03003324_02707 | Not Available | Negative | 2942201 - 2943019 | 30890.3 |
| carboxypepd_reg-like domain-containing protein | SAMN03003324_02708 | Not Available | Positive | 2943284 - 2944213 | 34607.1 |
| putative membrane protein | SAMN03003324_02709 | Not Available | Negative | 2944217 - 2945134 | 34863.0 |
| Trna-gly | Not Available | Not Available | Positive | 2945383 - 2945458 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2945504 - 2945588 | Not Available |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN03003324_02712 | Not Available | Negative | 2945675 - 2946781 | 41768.2 |
| predicted arabinose efflux permease, mfs family | SAMN03003324_02713 | Not Available | Negative | 2946893 - 2948107 | 41525.4 |
| arac-type dna-binding protein | SAMN03003324_02714 | Not Available | Negative | 2948209 - 2949117 | 34587.2 |
| hypothetical protein | SAMN03003324_02715 | Not Available | Positive | 2949372 - 2949581 | 7370.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

