Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN03003324_02696 | Not Available | Negative | 2932963 - 2933778 | 28966.3 |
| dna replication and repair protein recr | SAMN03003324_02697 | Not Available | Negative | 2933780 - 2934400 | 22732.6 |
| na+/proline symporter | SAMN03003324_02698 | Not Available | Positive | 2934483 - 2935961 | 54842.1 |
| hypothetical protein | SAMN03003324_02699 | Not Available | Positive | 2935979 - 2936686 | 26669.2 |
| uncharacterized membrane protein | SAMN03003324_02700 | Not Available | Negative | 2936712 - 2937302 | 21725.8 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN03003324_02701 | Not Available | Negative | 2937312 - 2939771 | 90776.7 |
| regulatory protein | SAMN03003324_02702 | Not Available | Positive | 2939838 - 2940332 | 19117.2 |
| Trna-gly | Not Available | Not Available | Positive | 2940463 - 2940538 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2940584 - 2940668 | Not Available |
| hypothetical protein | SAMN03003324_02705 | Not Available | Negative | 2940845 - 2940985 | 5417.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

