Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elaa protein | SAMN03003324_00205 | Not Available | Positive | 220714 - 221166 | 17232.1 |
| aquaporin z | SAMN03003324_00206 | Not Available | Positive | 221273 - 221980 | 24023.7 |
| para-nitrobenzyl esterase | SAMN03003324_00207 | Not Available | Positive | 221953 - 223686 | 63606.3 |
| gaf domain-containing protein | SAMN03003324_00208 | Not Available | Negative | 223757 - 224227 | 16917.3 |
| hypothetical protein | SAMN03003324_00209 | Not Available | Positive | 224340 - 224591 | 9737.72 |
| hypothetical protein | SAMN03003324_00210 | Not Available | Positive | 224870 - 225565 | 25555.1 |
| ribonucleoside-diphosphate reductase beta chain | SAMN03003324_00211 | Not Available | Negative | 225625 - 226611 | 37663.8 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN03003324_00212 | Not Available | Negative | 226640 - 228730 | 79961.8 |
| protein involved in ribonucleotide reduction | SAMN03003324_00213 | Not Available | Negative | 228735 - 229097 | 13743.3 |
| thioredoxin 1 | SAMN03003324_00214 | Not Available | Negative | 229122 - 229364 | 9069.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

