Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02686 | Not Available | Negative | 2921463 - 2922068 | 23030.8 |
| hypothetical protein | SAMN03003324_02687 | Not Available | Negative | 2922088 - 2922597 | 18826.7 |
| lipoprotein-releasing system atp-binding protein | SAMN03003324_02688 | Not Available | Negative | 2922601 - 2923251 | 23642.6 |
| succinyl-coa synthetase beta subunit | SAMN03003324_02689 | Not Available | Positive | 2923384 - 2924574 | 42717.4 |
| asparaginyl-trna synthetase | SAMN03003324_02690 | Not Available | Positive | 2925095 - 2926543 | 55688.3 |
| glutamate synthase domain-containing protein 2 | SAMN03003324_02691 | Not Available | Negative | 2926612 - 2928273 | 60356.5 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN03003324_02692 | Not Available | Positive | 2928353 - 2928973 | 22880.5 |
| tryptophan synthase, alpha chain | SAMN03003324_02693 | Not Available | Negative | 2929069 - 2929857 | 28663.4 |
| phosphoribosylanthranilate isomerase | SAMN03003324_02694 | Not Available | Negative | 2929879 - 2931708 | 67263.5 |
| anthranilate phosphoribosyltransferase | SAMN03003324_02695 | Not Available | Negative | 2931705 - 2932691 | 35953.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

