Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN03003324_02676 | Not Available | Negative | 2907658 - 2908242 | 22077.5 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN03003324_02677 | Not Available | Negative | 2908541 - 2911789 | 118631.0 |
| dihydrolipoamide dehydrogenase | SAMN03003324_02678 | Not Available | Positive | 2912156 - 2913544 | 48740.1 |
| glyoxylase, beta-lactamase superfamily ii | SAMN03003324_02679 | Not Available | Positive | 2913644 - 2914483 | 32018.5 |
| calcineurin-like phosphoesterase | SAMN03003324_02680 | Not Available | Positive | 2914539 - 2915342 | 30167.8 |
| hypothetical protein | SAMN03003324_02681 | Not Available | Positive | 2915320 - 2915907 | 22338.2 |
| rna polymerase primary sigma factor | SAMN03003324_02682 | Not Available | Positive | 2916240 - 2917100 | 32678.1 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN03003324_02683 | Not Available | Positive | 2917188 - 2918636 | 53719.3 |
| peptidase family m28 | SAMN03003324_02684 | Not Available | Positive | 2918791 - 2919726 | 34874.4 |
| peptidase family s41 | SAMN03003324_02685 | Not Available | Negative | 2919780 - 2921423 | 60877.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

