Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-fructose 1,6-bisphosphatase | SAMN03003324_02666 | Not Available | Negative | 2894469 - 2895503 | 37551.0 |
| hypothetical protein | SAMN03003324_02667 | Not Available | Negative | 2895526 - 2896017 | 18440.4 |
| trna1val (adenine37-n6)-methyltransferase | SAMN03003324_02668 | Not Available | Negative | 2896047 - 2896751 | 26651.5 |
| glyoxylase i family protein | SAMN03003324_02669 | Not Available | Negative | 2896754 - 2897149 | 15087.9 |
| protein tonb | SAMN03003324_02670 | Not Available | Negative | 2897234 - 2898070 | 30700.5 |
| glutamine synthetase | SAMN03003324_02671 | Not Available | Positive | 2898332 - 2900515 | 81663.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN03003324_02672 | Not Available | Positive | 2900623 - 2901807 | 42645.0 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN03003324_02673 | Not Available | Negative | 2901893 - 2905066 | 114290.0 |
| membrane fusion protein, multidrug efflux system | SAMN03003324_02674 | Not Available | Negative | 2905091 - 2906260 | 41117.9 |
| outer membrane protein tolc | SAMN03003324_02675 | Not Available | Negative | 2906268 - 2907602 | 50464.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

