Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | SAMN03003324_02656 | Not Available | Positive | 2887316 - 2888686 | 49465.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN03003324_02657 | Not Available | Negative | 2888743 - 2889351 | 22246.1 |
| hypothetical protein | SAMN03003324_02658 | Not Available | Negative | 2889642 - 2890070 | 15599.5 |
| glyoxylase, beta-lactamase superfamily ii | SAMN03003324_02659 | Not Available | Negative | 2890102 - 2891466 | 50021.1 |
| hypothetical protein | SAMN03003324_02660 | Not Available | Negative | 2891479 - 2891892 | 15283.2 |
| hypothetical protein | SAMN03003324_02661 | Not Available | Negative | 2891902 - 2892459 | 20566.6 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN03003324_02662 | Not Available | Negative | 2892539 - 2893174 | 24525.8 |
| Trna-met | Not Available | Not Available | Positive | 2893429 - 2893504 | Not Available |
| hypothetical protein | SAMN03003324_02664 | Not Available | Negative | 2893520 - 2893771 | 9540.35 |
| rnase hi | SAMN03003324_02665 | Not Available | Positive | 2893951 - 2894424 | 17789.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

