Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02636 | Not Available | Negative | 2867483 - 2868232 | 26974.6 |
| hypothetical protein | SAMN03003324_02637 | Not Available | Negative | 2868283 - 2868852 | 22840.7 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN03003324_02638 | Not Available | Negative | 2868864 - 2869736 | 31109.4 |
| carboxyl-terminal processing protease | SAMN03003324_02639 | Not Available | Positive | 2869847 - 2871454 | 59323.5 |
| gtp-binding protein | SAMN03003324_02640 | Not Available | Negative | 2871511 - 2872812 | 49055.2 |
| gtp-binding protein era | SAMN03003324_02641 | Not Available | Negative | 2872857 - 2873735 | 33610.6 |
| Trna-met | Not Available | Not Available | Positive | 2873846 - 2873921 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2873957 - 2874031 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2874072 - 2874147 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2874191 - 2874262 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

