Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoisovalerate dehydrogenase e1 component | SAMN03003324_02595 | Not Available | Negative | 2821096 - 2823078 | 72822.7 |
| l-lactate dehydrogenase complex protein lldf | SAMN03003324_02596 | Not Available | Negative | 2823084 - 2824472 | 52335.1 |
| peptidase family m28 | SAMN03003324_02597 | Not Available | Negative | 2824588 - 2826210 | 58940.0 |
| ribose 5-phosphate isomerase b | SAMN03003324_02598 | Not Available | Negative | 2826227 - 2826664 | 15831.0 |
| sec-independent protein translocase tatc | SAMN03003324_02599 | Not Available | Negative | 2826697 - 2827587 | 33460.1 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN03003324_02600 | Not Available | Negative | 2827670 - 2829043 | 50838.9 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN03003324_02601 | Not Available | Negative | 2829047 - 2829520 | 16975.5 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN03003324_02602 | Not Available | Negative | 2829590 - 2830579 | 35825.6 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN03003324_02603 | Not Available | Negative | 2830593 - 2831531 | 33652.1 |
| large subunit ribosomal protein l32 | SAMN03003324_02604 | Not Available | Negative | 2831632 - 2831823 | 7073.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

