Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | SAMN03003324_00195 | Not Available | Negative | 209763 - 211223 | 56012.1 |
| response regulator receiver domain-containing protein | SAMN03003324_00196 | Not Available | Positive | 211348 - 211719 | 13834.7 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | SAMN03003324_00197 | Not Available | Negative | 211704 - 212900 | 43789.2 |
| nadh dehydrogenase | SAMN03003324_00198 | Not Available | Negative | 212950 - 214251 | 48244.4 |
| l-alanine-dl-glutamate epimerase | SAMN03003324_00199 | Not Available | Negative | 214268 - 215398 | 41589.8 |
| anhydro-n-acetylmuramic acid kinase | SAMN03003324_00200 | Not Available | Negative | 215429 - 216622 | 42892.8 |
| hypothetical protein | SAMN03003324_00201 | Not Available | Positive | 217089 - 217490 | 15551.4 |
| methionyl aminopeptidase | SAMN03003324_00202 | Not Available | Negative | 217516 - 218316 | 29280.1 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN03003324_00203 | Not Available | Positive | 218606 - 219742 | 43018.9 |
| arac-type dna-binding protein | SAMN03003324_00204 | Not Available | Positive | 219755 - 220549 | 30477.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

