Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN03003324_02585 | Not Available | Positive | 2809709 - 2811079 | 49040.4 |
| membrane-bound lytic murein transglycosylase d | SAMN03003324_02586 | Not Available | Positive | 2811239 - 2812561 | 49267.4 |
| holliday junction dna helicase subunit ruva | SAMN03003324_02587 | Not Available | Positive | 2812574 - 2813158 | 21284.2 |
| glycine cleavage system h protein | SAMN03003324_02588 | Not Available | Positive | 2813352 - 2813732 | 13748.0 |
| vanz like family protein | SAMN03003324_02589 | Not Available | Positive | 2813736 - 2814167 | 16741.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN03003324_02590 | Not Available | Positive | 2814306 - 2817158 | 103608.0 |
| ferrous iron transport protein a | SAMN03003324_02591 | Not Available | Positive | 2817243 - 2817458 | 7752.63 |
| ferrous iron transport protein b | SAMN03003324_02592 | Not Available | Positive | 2817464 - 2819581 | 78266.4 |
| sprt-like family protein | SAMN03003324_02593 | Not Available | Positive | 2819661 - 2820275 | 24039.7 |
| hypothetical protein | SAMN03003324_02594 | Not Available | Negative | 2820224 - 2821048 | 31251.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

