Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase f | SAMN03003324_02575 | Not Available | Negative | 2801154 - 2802200 | 37858.6 |
| cytosine/adenosine deaminase | SAMN03003324_02576 | Not Available | Positive | 2802395 - 2803564 | 43591.6 |
| enoyl-[acyl-carrier protein] reductase ii | SAMN03003324_02577 | Not Available | Positive | 2803566 - 2804522 | 33664.2 |
| acylphosphatase | SAMN03003324_02578 | Not Available | Positive | 2804553 - 2804831 | 10672.8 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN03003324_02579 | Not Available | Positive | 2804849 - 2806360 | 57643.6 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMN03003324_02580 | Not Available | Positive | 2806382 - 2806813 | 15682.0 |
| protein of unknown function | SAMN03003324_02581 | Not Available | Positive | 2806855 - 2807643 | 29483.2 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN03003324_02582 | Not Available | Positive | 2807666 - 2808919 | 47069.7 |
| sec-independent protein translocase protein tata | SAMN03003324_02583 | Not Available | Positive | 2808957 - 2809397 | 15630.6 |
| sec-independent protein translocase protein tata | SAMN03003324_02584 | Not Available | Positive | 2809408 - 2809611 | 7150.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

