Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN03003324_02555 | Not Available | Negative | 2775644 - 2776807 | 44373.9 |
| hypothetical protein | SAMN03003324_02556 | Not Available | Positive | 2776859 - 2777032 | 6603.91 |
| pas domain s-box-containing protein | SAMN03003324_02557 | Not Available | Positive | 2777007 - 2778518 | 57016.5 |
| response regulator receiver domain-containing protein | SAMN03003324_02558 | Not Available | Positive | 2778609 - 2778998 | 14569.8 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN03003324_02559 | Not Available | Positive | 2779154 - 2779762 | 22650.6 |
| hypothetical protein | SAMN03003324_02560 | Not Available | Positive | 2779817 - 2782684 | 108819.0 |
| hypothetical protein | SAMN03003324_02561 | Not Available | Negative | 2782711 - 2784111 | 48982.0 |
| hypothetical protein | SAMN03003324_02562 | Not Available | Negative | 2784068 - 2784874 | 29364.1 |
| hypothetical protein | SAMN03003324_02563 | Not Available | Negative | 2784880 - 2785416 | 18374.8 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN03003324_02564 | Not Available | Negative | 2785490 - 2786290 | 30229.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

