Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN03003324_02535 | Not Available | Negative | 2750177 - 2752186 | 75554.2 |
| response regulator receiver domain-containing protein | SAMN03003324_02536 | Not Available | Negative | 2752229 - 2752651 | 15913.3 |
| arac-type dna-binding protein | SAMN03003324_02537 | Not Available | Negative | 2752656 - 2753645 | 38963.8 |
| hypothetical protein | SAMN03003324_02538 | Not Available | Positive | 2753980 - 2754381 | 15827.8 |
| hypothetical protein | SAMN03003324_02539 | Not Available | Negative | 2754421 - 2755479 | 39450.7 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN03003324_02540 | Not Available | Negative | 2755481 - 2757814 | 85493.1 |
| capsule assembly protein wzi | SAMN03003324_02541 | Not Available | Negative | 2757868 - 2759517 | 63274.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_02542 | Not Available | Negative | 2759598 - 2760833 | 46549.2 |
| dtdp-4-dehydrorhamnose reductase | SAMN03003324_02543 | Not Available | Positive | 2761081 - 2762010 | 36110.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_02544 | Not Available | Positive | 2762001 - 2763104 | 41658.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

