Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02505 | Not Available | Positive | 2712699 - 2713613 | 34880.1 |
| epsg family protein | SAMN03003324_02506 | Not Available | Positive | 2713622 - 2714692 | 40977.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_02507 | Not Available | Positive | 2714707 - 2715789 | 41315.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_02508 | Not Available | Positive | 2715816 - 2716592 | 29222.2 |
| acetyltransferase (isoleucine patch superfamily) | SAMN03003324_02509 | Not Available | Positive | 2716589 - 2717161 | 21107.7 |
| protein of unknown function | SAMN03003324_02510 | Not Available | Positive | 2717122 - 2719476 | 89904.1 |
| dtdp-l-rhamnose 4-epimerase | SAMN03003324_02511 | Not Available | Positive | 2719510 - 2720643 | 41719.6 |
| hypothetical protein | SAMN03003324_02512 | Not Available | Positive | 2720655 - 2721650 | 39008.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN03003324_02513 | Not Available | Positive | 2721647 - 2722525 | 31388.0 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN03003324_02514 | Not Available | Positive | 2722531 - 2723496 | 36669.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

